2.5-day workshop

* I will use the following computer system during the course:

Windows (PC) MAC (OSX) Linux (might not be fully functional)

* I am doing imaging experiments…

* I am doing research in the following areas: shortly describe if you are working with a specific imaging devices and which kind of samples (cells, animal, human patients,…) and shortly mention imaging related methods you are working with (e.g. confocal, brightfield, IF, ICC, IHC, tracking, co-localization,………)

* For remaining time we will talk about additional optional analysis methods. Please choose one of the following which seems most important/interesting for your work. Highest voting decides about the method we will include. Besides this we also might include time for individual solutions.

Basics in manual macro scripting for customized automation (manually adjust recorded macros) Statistical co-localization analysis (of objects from different fluorescent channels) I would prefer to work on my own images under supervision in the remaining time to practice the learned Detailed automated tracking and analysis of moving objects in 4D 3D Network Tracing (analyzing neuronal networks or vessels in 3D space) 3D-Segmentation (extracting features/objects from 3D images, e.g. tumors in medical MRI-stacks) 3D measurements (volume, surface, intensity, object distances)

BioVoxxel

Scientific Image Processing and Analysis