BioVoxxel's Expertise Areas

Scientific Education

Software Solutions

Image Integrity

The BioVoxxel Workshops

For groups and individuals

Scientific Illustration - The Inkscape Masterclass

Scientific Image Editing and Figure Creation

Basic Microscopic Image Processing and Analysis

ImageJ Macro Scripting for Automatic Image Analysis

From Pixels to Patterns: Applied Machine Learning

Detailed BioVoxxel's Services

Group Workshops

Live online workshops to learn via many hands-on exercises and ask the image analysis expert. Benefit from over a decade of expertise.

Self-Learning Courses

Learn image analysis, publication figure creation or scientific illustration at your own pace. The full content of the group workshops... and more!

Customized Analysis Solutions

Customized software solutions for your individual image analysis or consulting regarding all topics related to image analysis and automation

Scientific Illustration Service

Get your professional 2D/3D journal cover art, graphical abstract or short animations to communicate your research

1:1-Coaching

Hourly-based coaching sessions on image analysis problems or help with own ImageJ macro programming issues.

Free Software Tools

Multiple free tools for Fiji (ImageJ bundle). Featuring the NEW BioVoxxel 3D Box for GPU-accelerated image processing and analysis

Boost your Image Analysis - Today!

Take Action - Contact BioVoxxel
Questions Inquiry

Experience in Figures

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Years in Business
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Client Institutions
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Workshops Given
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Students Taught
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Years Experience
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Fiji Plugins
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Lines of code
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Scientific Citations

Free BioVoxxel Tools

All free tools can be installed as Fiji update sites
  • BioVoxxel Figure Tools
  • Inkscape Extensions
  • BioVoxxel 3D Box
  • BioVoxxel Toolbox
  • Excel Functions

The BioVoxxel Figure Tools enable you to create high quality, publication figure grade images out of Fiji.
Export your images including scale bars and all labels as SVG vector graphics in 100% quality.
Those tools empower you to easily make figures in Inkscape without data alterations.

Code on Github

Documentation

DOI

Please cite the tool

The BioVoxxel Inkscape Extensions are created to be used in combination with the Figure Tools. They are little helpers to improve the figure creation experience.
Those tools empower you to easily make figures in Inkscape without data alterations.

Code on Github

Documentation

Fiji plugins for 2D and 3D image processing and analysis in one place. All functions are heavily GPU-based via the fabulous CLIJ2 library. All you need for image segmentation, labels processing and quality control.

Featured Tool is the Voronoi Threshold Labeler (VTL) for 2D/3D object segmentation.

Code on Github

Documentation

DOI

Please cite the tool

The BioVoxxel Toolbox is an established ImageJ/Fiji suite which contains plugins and some macros dealing with image filtering, image segmentation and binary image processing as well as various analysis tools, such as cluster analysis and comparative object counting and measurements.

Code on Github

Documentation

DOI

Please cite the tool

The Excel macro extensions for ImageJ and Fiji are meant to make saving results tables as .xlsx worksheet files and tabs in ImageJ and Fiji easily accessible on various different levels.

Code on Gitlab

Maven Repository

Documentation

The Person behind BioVoxxel

Dr. Jan Brocher

Founder of BioVoxxel
After my PhD in molecular biology in 2007, several years of international scientific research experience, I turned my passion into my profession. Working since 2012 as freelance Bio-Image Analyst, software developer, trainer and consultant in an ever growing field of scientific image analysis.

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